Unable to load shared object 'C:/Users/./Documents/R/win-library/3.4/rtracklayer/libs/圆4/rtracklayer.dll':ĮRROR: lazy loading failed for package 'powsimR' Warning: replacing previous import 'DECENT::lrTest' by 'MAST::lrTest' when loading 'powsimR'Įrror in inDL(x, as.logical(local), as.logical(now). Installing package into ‘C:/Users/./Documents/R/win-library/3.4’ Install.packages("C:/Users/./Downloads/", repos = NULL, type = "source") Thank you for the advice, I hate to be the bearer of bad news but that didnt work either, here is the log I also used the alternative method but that gives the same results. Installation failed: SVN does not seem to be installed on your system. Rd warning: C:/Users/gcrynen/AppData/Local/Temp/Rtmpg5DfOm/devtools2fe0397630a0/statOmics-zingeR-c789ae5/man/zeroWeightsLS.Rd:25: missing file link 'DESeqDataSet-class'ĭevtools::install_github("bvieth/powsimR", build_vignettes = TRUE, dependencies = FALSE) Rd warning: C:/Users/gcrynen/AppData/Local/Temp/Rtmpg5DfOm/devtools2fe0397630a0/statOmics-zingeR-c789ae5/man/zeroWeightsLS.Rd:23: missing file link 'DESeqDataSet-class' Rd warning: C:/Users/gcrynen/AppData/Local/Temp/Rtmpg5DfOm/devtools2fe0397630a0/statOmics-zingeR-c789ae5/man/independentFiltering.Rd:14: missing file link 'glmLRT' Rd warning: C:/Users/gcrynen/AppData/Local/Temp/Rtmpg5DfOm/devtools2fe0397630a0/statOmics-zingeR-c789ae5/man/glmWeightedF.Rd:37: missing file link 'glmLRT' Rd warning: C:/Users/gcrynen/AppData/Local/Temp/Rtmpg5DfOm/devtools2fe0397630a0/statOmics-zingeR-c789ae5/man/glmWeightedF.Rd:20: missing file link 'glmLRT' "C:/Users/gcrynen/AppData/Local/Temp/Rtmpg5DfOm/devtools2fe0397630a0/statOmics-zingeR-c789ae5" Package ‘DESeq2’ successfully unpacked and MD5 sums checkedĬ:\Users\gcrynen\AppData\Local\Temp\Rtmpg5DfOm\downloaded_packages Installing package into ‘C:/Users/gcrynen/Documents/R/win-library/3.4’Ĭontent type 'application/zip' length 4542389 bytes (4.3 MB) "C:/Users/gcrynen/AppData/Local/Temp/Rtmpg5DfOm/devtools2fe019ed2c37/mohuangx-SAVER-b2e9ff0" Installing to C:/Users/gcrynen/Documents/R/win-library/3.4/DECENT/libs/圆4 Installing to C:/Users/gcrynen/Documents/R/win-library/3.4/DECENT/libs/i386Ĭ:/RBuildTools/3.4/mingw_64/bin/g++ -I"C:/PROGRA 1/R/R-341.4/include" -DNDEBUG -I"C:/Users/gcrynen/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/gcrynen/Documents/R/win-library/3.4/RcppEigen/include" -I"C:/Users/gcrynen/Documents/R/win-library/3.4/RcppNumerical/include" -O2 -Wall -mtune=generic -c LRT_logl.cpp -o LRT_logl.oĬ:/RBuildTools/3.4/mingw_64/bin/g++ -I"C:/PROGRA 1/R/R-341.4/include" -DNDEBUG -I"C:/Users/gcrynen/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/gcrynen/Documents/R/win-library/3.4/RcppEigen/include" -I"C:/Users/gcrynen/Documents/R/win-library/3.4/RcppNumerical/include" -O2 -Wall -mtune=generic -c RcppExports.cpp -o RcppExports.oĬ:/RBuildTools/3.4/mingw_64/bin/g++ -shared -s -static-libgcc -o DECENT.dll tmp.def LRT_logl.o RcppExports.o -LC:/PROGRA 1/R/R-341.4/bin/圆4 -lR "C:/Users/gcrynen/AppData/Local/Temp/Rtmpg5DfOm/devtools2fe0112a1c87/cz-ye-DECENT-fb9a045"Ĭ:/RBuildTools/3.4/mingw_32/bin/g++ -I"C:/PROGRA 1/R/R-341.4/include" -DNDEBUG -I"C:/Users/gcrynen/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/gcrynen/Documents/R/win-library/3.4/RcppEigen/include" -I"C:/Users/gcrynen/Documents/R/win-library/3.4/RcppNumerical/include" -O2 -Wall -mtune=generic -c LRT_logl.cpp -o LRT_logl.oĬ:/RBuildTools/3.4/mingw_32/bin/g++ -I"C:/PROGRA 1/R/R-341.4/include" -DNDEBUG -I"C:/Users/gcrynen/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/gcrynen/Documents/R/win-library/3.4/RcppEigen/include" -I"C:/Users/gcrynen/Documents/R/win-library/3.4/RcppNumerical/include" -O2 -Wall -mtune=generic -c RcppExports.cpp -o RcppExports.oĬ:/RBuildTools/3.4/mingw_32/bin/g++ -shared -s -static-libgcc -o DECENT.dll tmp.def LRT_logl.o RcppExports.o -LC:/PROGRA 1/R/R-341.4/bin/i386 -lR ** testing if installed package can be loaded Unable to find LaTeX package 'framed' will use a copy from knitr Warning in test_latex_pkg("framed", system.file("misc", "framed.sty", package = "knitr")) : library="C:/Users/gcrynen/Documents/R/win-library/3.4" -install-tests "C:/Users/gcrynen/AppData/Local/Temp/Rtmpg5DfOm/devtools2fe076323993/nghiavtr-BPSC-1fe6f32" Ipak(githubpackages, repository = "github") Githubpackages <- c("nghiavtr/BPSC", "cz-ye/DECENT", "mohuangx/SAVER", "statOmics/zingeR") Ipak(biocpackages, repository = "Bioconductor") GITHUB
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